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Found 3844 results for path Down-Up-Down. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM logFC M26/M2 FDR M26/M2 Classification Human genes C.elegans genes Annotation
1. MligTC454_59554 Mlig065844.g2 11.81 0.045 0.799

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Germline

WBP2NL Mlig065844.g2 {REF} {Length: 1752} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [RH, Score=53.9, Expect=6e-08]} {Mouse: ENSMUSG00000022455, Wbp2nl, WBP2 N-terminal like, [Score=56.6, Expect=9e-09]} {RNA1509_11504, RNA1509_19310, RNA1509_35467, RNA1509_3933, RNA1509_4048, RNA1509_4521, RNA1509_48578, RNA1509_52628}
2. MligTC454_59553 Mlig022465.g5 11.71 0.189 0.123

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Germline

WBP2NL Mlig022465.g5 {REF} {Length: 1670} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [RH, Score=54.7, Expect=3e-08]} {Mouse: ENSMUSG00000022455, Wbp2nl, WBP2 N-terminal like, [Score=59.3, Expect=1e-09]} {RNA1509_1798, RNA1509_2178, RNA1509_47, RNA1509_48, RNA1509_51669, RNA1509_7956}
3. MligTC454_31769 Mlig058586.g4 10.33 0.277 0.100

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Irradiation

TBATA Mlig058586.g4 {REF} {Length: 4827} {Pfam: SPATIAL [PF15256.6, score=103.7]} {Human: ENSG00000166220, TBATA, thymus, brain and testes associated, [RH, Score=54.7, Expect=2e-07]} {Mouse: ENSMUSG00000020096, Tbata, thymus, brain and testes associated, [Score=62.0, Expect=8e-10]} {Smed: dd_Smed_v6_8051_0_1, dd_Smed_v6_8051_0_1, [Score=56.6, Expect=2e-08]} {RNA1509_45918, RNA1509_6863} {SMEDTYPE: Xins [raj_facs_types]}
4. MligTC454_55611 Mlig018268.g2, Mlig051606.g2 9.94 0.011 0.968

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Irradiation

Mlig018268.g2 {REF} {Length: 557} {NoTransDecoderORF} {RNA1509_30}

Mlig051606.g2 {REF} {Length: 1278} {RNA1509_37248}
5. MligTC454_48194 Mlig009159.g7 9.7 0.655 0.000

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Mlig009159.g7 {REF} {Length: 3436} {RNA1509_16}
6. MligTC454_33289 Mlig005381.g5 9.48 -0.539 0.000

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WSCD2 Mlig005381.g5 {REF} {Length: 1369} {Pfam: WSC domain [PF01822.19, score=81.4]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=55.1, Expect=2e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=60.5, Expect=2e-10]} {RNA1509_101, RNA1509_594}
7. MligTC454_40032 Mlig015343.g7 9.44 -0.612 0.000

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DYNLL1 dlc-1 Mlig015343.g7 {REF} {Length: 1253} {Pfam: Dynein light chain type 1 [PF01221.18, score=66.4]; EF-hand domain [PF14658.6, score=21.9]; EF-hand domain pair [PF13499.6, score=20.8]; EF hand [PF00036.32, score=19.6]; EF-hand domain [PF13405.6, score=19.4]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=48.9, Expect=1e-07]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=48.9, Expect=7e-08]} {Dmel: FBgn0011760, ctp, cut up, [Score=47.0, Expect=3e-07]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=45.1, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=118, Expect=4e-34]} {RNA1509_211, RNA1509_344, RNA1509_38667}
8. MligTC454_43134 Mlig068231.g1 9.29 -1.403 0.000

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Mlig068231.g1 {REF} {Length: 965} {TRANSSPLICED} {RNA1509_25}
9. MligTC454_42935 Mlig033741.g8 9.16 -0.234 0.044

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Mlig033741.g8 {REF} {Length: 1222} {RNA1509_14617, RNA1509_40, RNA1509_5391, RNA1509_56639, RNA1509_9468}
10. MligTC454_75745 Mlig116963.g1 9.08 -0.170 0.276

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REEP5 yop-1 Mlig116963.g1 {REF} {Length: 4231} {Pfam: TB2/DP1, HVA22 family [PF03134.19, score=96.2]} {Human: ENSG00000129625, REEP5, receptor accessory protein 5, [RH, Score=188, Expect=2e-60]; ENSG00000115255, REEP6, receptor accessory protein 6, [RH, Score=179, Expect=5e-57]} {Mouse: ENSMUSG00000005873, Reep5, receptor accessory protein 5, [RH, Score=189, Expect=5e-61]} {Dmel: FBgn0033906, CG8331, [RH, Score=147, Expect=6e-45]} {Celegans: WBGene00022127, yop-1, Receptor expression-enhancing protein, [RH, Score=153, Expect=5e-47]} {Smed: dd_Smed_v6_838_0_1, dd_Smed_v6_838_0_1, [RH, Score=219, Expect=3e-73]} {RNA1509_45496, RNA1509_60136} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.265479.1]} {SMEDTYPE: repression [16]}
11. MligTC454_60235 Mlig005406.g3 9.01 0.032 0.847

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Mlig005406.g3 {REF} {Length: 1927} {Pfam: Ependymin [PF00811.18, score=60.7]} {RNA1509_105, RNA1509_17332, RNA1509_30580, RNA1509_37256, RNA1509_47170, RNA1509_53640, RNA1509_5561}
12. MligTC454_43957 Mlig013123.g5 8.9 -0.336 0.003

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TUBA1A mec-12 Mlig013123.g5 {REF} {Length: 5872} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.25, score=226.3]; Tubulin C-terminal domain [PF03953.17, score=170.9]; Helitron helicase-like domain at N-terminus [PF14214.6, score=101.4]; PIF1-like helicase [PF05970.14, score=97.3]; AAA domain [PF13604.6, score=60.5]; AAA domain [PF13245.6, score=33.9]; Tubulin domain [PF14881.6, score=19.0]} {Human: ENSG00000167552, TUBA1A, tubulin alpha 1a, [RH, Score=946, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [RH, Score=944, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [RH, Score=937, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [RH, Score=937, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [RH, Score=920, Expect=0.0]} {Mouse: ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [RH, Score=946, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [RH, Score=944, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [RH, Score=937, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [RH, Score=937, Expect=0.0]; ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [RH, Score=928, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [RH, Score=932, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=862, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_2, dd_Smed_v6_10947_0_2, [RH, Score=944, Expect=0.0]} {RNA1509_2607} {SMEDTYPE: Testis [Contig7537_SE3]}
13. MligTC454_58461 Mlig007972.g5 8.82 0.372 0.019

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Irradiation

Mlig007972.g5 {REF} {Length: 2262} {RNA1509_27483, RNA1509_29194, RNA1509_4744, RNA1509_5328}
14. MligTC454_35610 Mlig032926.g29 8.76 -0.372 0.000

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GenAge

CFL1 unc-60 Mlig032926.g29 {REF} {Length: 1268} {TRANSSPLICED} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.20, score=97.2]} {Human: ENSG00000172757, CFL1, cofilin 1, [Score=72.0, Expect=4e-16]} {Mouse: ENSMUSG00000056201, Cfl1, cofilin 1, non-muscle, [Score=72.8, Expect=5e-16]} {Dmel: FBgn0011726, tsr, twinstar, [Score=82.4, Expect=2e-20]} {Celegans: WBGene00006794, unc-60, Actin-depolymerizing factor 2, isoform c, [Score=68.2, Expect=3e-15]} {Smed: dd_Smed_v6_260_0_1, dd_Smed_v6_260_0_1, [RH, Score=108, Expect=3e-31]} {RNA1509_1229, RNA1509_263, RNA1509_5166} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.44656.0]}
15. MligTC454_58460 Mlig012077.g11, Mlig012077.g2 8.74 0.106 0.576

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Irradiation

Mlig012077.g11 {REF} {Length: 1730} {RNA1509_4744}

Mlig012077.g2 {REF} {Length: 1751} {RNA1509_4744}
16. MligTC454_55528 Mlig024642.g4 8.47 0.599 0.000

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Irradiation

Mlig024642.g4 {REF} {Length: 530} {TRANSSPLICED} {RNA1509_3406}
17. MligTC454_63229 Mlig108390.g1 8.42 -0.232 0.025

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UBC ubq-1 Mlig108390.g1 {REF} {Length: 1609} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.23, score=658.5]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.8, score=309.6]; Ubiquitin-like domain [PF14560.6, score=122.7]; TANK binding kinase 1 ubiquitin-like domain [PF18396.1, score=83.5]; Ubiquitin-2 like Rad60 SUMO-like [PF13881.6, score=76.7]; Ubiquitin-like domain [PF18037.1, score=74.0]; DUF2407 ubiquitin-like domain [PF10302.9, score=62.5]; Protein of unknown function (DUF2870) [PF11069.8, score=36.0]; UDP-glucose:Glycoprotein Glucosyltransferase [PF06427.11, score=33.6]; Toluene-4-monooxygenase system protein B (TmoB) [PF06234.12, score=31.7]; Bacterial Ig domain [PF17957.1, score=30.5]; Protein of unknown function (DUF969) [PF06149.12, score=28.0]; Ubiquitin-like domain [PF18036.1, score=25.0]; GDYXXLXY protein [PF14345.6, score=24.8]; Raf-like Ras-binding domain [PF02196.15, score=24.1]; FlgD Ig-like domain [PF13860.6, score=23.5]; ORF11CD3 domain [PF10549.9, score=22.6]; Domain of Unknown Function with PDB structure (DUF3861) [PF12977.7, score=21.1]; CorA-like Mg2+ transporter protein [PF01544.18, score=19.9]} {Human: ENSG00000150991, UBC, ubiquitin C, [RH, Score=879, Expect=0.0]} {Mouse: ENSMUSG00000008348, Ubc, ubiquitin C, [RH, Score=879, Expect=0.0]} {Dmel: FBgn0086558, Ubi-p5E, Ubiquitin-5E, [RH, Score=879, Expect=0.0]} {Celegans: WBGene00006727, ubq-1, Polyubiquitin-A Ubiquitin Ubiquitin-related, [RH, Score=863, Expect=0.0]} {Smed: dd_Smed_v6_1697_0_2, dd_Smed_v6_1697_0_2, [RH, Score=164, Expect=6e-50]} {RNA1509_43738, RNA1509_47440}
18. MligTC454_46675 Mlig017900.g6 8.41 -0.122 0.396

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Mlig017900.g6 {REF} {Length: 2269} {Pfam: Brain specific membrane anchored protein [PF12280.8, score=20.0]} {RNA1509_289}
19. MligTC454_59031 Mlig047266.g1 8.28 -0.644 0.000

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Mlig047266.g1 {REF} {Length: 4572} {RNA1509_166, RNA1509_55305}
20. MligTC454_73618 Mlig060674.g4 8.24 -0.410 0.000

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TSPAN3 tsp-7 Mlig060674.g4 {REF} {Length: 2804} {Pfam: Tetraspanin family [PF00335.20, score=111.1]} {Human: ENSG00000140391, TSPAN3, tetraspanin 3, [Score=108, Expect=7e-29]} {Mouse: ENSMUSG00000032324, Tspan3, tetraspanin 3, [Score=106, Expect=6e-28]} {Dmel: FBgn0032075, Tsp29Fb, Tetraspanin 29Fb, [Score=72.0, Expect=6e-15]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [Score=75.9, Expect=7e-17]} {Smed: dd_Smed_v6_2452_0_1, dd_Smed_v6_2452_0_1, [Score=122, Expect=1e-34]} {RNA1509_1215} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Sexual_specific [CUFF.266395.0]}
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